ICGi022-A-6

K74-AsCas12a-N1-26

General

Cell Line

hPSCreg name ICGi022-A-6
Cite as:
ICGi022-A-6
Alternative name(s)
K74-AsCas12a-N1-26
Cell line type Human induced pluripotent stem cell (hiPSC)
Similar lines
ICGi022-A
(K7-4Lf)
Donor diseases:
Healthy Subject
ICGi022-A-1
(SOD1-G128R_K7-4L-f, SOD1-G128R)
Donor diseases:
Healthy Subject
ICGi022-A-3
(K7-MYBPC3-N515del-1)
Donor diseases:
Healthy Subject
ICGi022-A-4
(K7-MYBPC3-N515del-2)
Donor diseases:
Healthy Subject
ICGi022-A-8
(K7-4 T32)
Donor diseases:
Healthy Subject
ICGi022-A-5
(K7-MYBPC3-N515del-3)
Donor diseases:
Healthy Subject
ICGi022-A-2
(SOD1-D91A, SOD1-D91A_K7-4Lf)
Donor diseases:
Healthy Subject
ICGi022-A-7
(K74-AsCas12aY1-17)
Donor diseases:
Healthy Subject
ICGi022-B
(K7-2Lf)
Donor diseases:
Healthy Subject
Last update 6th July 2023
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Provider

Generator Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences (ICG)

External Databases

BioSamples SAMEA113986984

General Information

* Is the cell line readily obtainable for third parties?
No
Subclone of

Donor Information

General Donor Information

Sex female
Ethnicity Caucasian

Phenotype and Disease related information (Donor)

Diseases No disease was diagnosed.
The donor is not affected.
Synonyms
  • Healthy Subject
  • Healthy Volunteer
  • healthy volunteer

Karyotyping (Donor)

Has the donor karyotype been analysed?
No

Other Genotyping (Donor)

Is there genome-wide genotyping or functional data available?
Yes
Exome sequencing
https://www.ncbi.nlm.nih.gov/sra/?term=SRR11413027
No disease associated mutation found

Donor Relations

Other cell lines of this donor

External Databases (Donor)

BioSamples SAMN14446266

Ethics

Also have a look at the ethics information for the parental line ICGi022-A .
Is there an MTA available for the cell line? No
For generation of the cell line, who was the supplier of any recombined DNA vectors or commercial kits used?

hIPSC Derivation

General

The source cell information can be found in the parental cell line ICGi022-A.

Reprogramming method

Vector type Non-integrating
Vector Episomal
Is reprogramming vector detectable?
No
Methods used
PCR

Vector free reprogramming

Other

Derived under xeno-free conditions
No
Derived under GMP?
No
Available as clinical grade?
No

Culture Conditions

Surface coating Gelatin
Feeder cells Mouse embryonic fibroblasts
Cellfinder Ont Id: http://www.ebi.ac.uk/efo/EFO_0004040
Passage method Enzymatically
TrypLE
O2 Concentration 20 %
CO2 Concentration 5 %
Medium Other medium:
Base medium: Knock-out DMEM
Main protein source: Knock-out serum replacement
Serum concentration: 15 %
Supplements
GlutaMAX 2 mM
NEAA 0.1 mM
Penicillin-Streptomycin 100 U/ml
rhFGF basic 10 ng/ml
Has Rock inhibitor (Y27632) been used at passage previously with this cell line?
Yes
Has Rock inhibitor (Y27632) been used at cryo previously with this cell line?
No
Has Rock inhibitor (Y27632) been used at thaw previously with this cell line?
Yes

Characterisation

Analysis of Undifferentiated Cells
Marker Expressed Immunostaining RT-PCR Flow Cytometry Enzymatic Assay Expression Profiles
NANOG
Yes
POU5F1 (OCT-4)
Yes
Morphology pictures
Differentiation Potency
Hepatocyte
Ont Id: CL_0000182
Endoderm
Ont Id: UBERON_0000925
In vitro spontaneous differentiation
Marker Expressed
CK-18
Yes
Mesoderm
Ont Id: UBERON_0000926
In vitro spontaneous differentiation
Marker Expressed
aSMA
Unknown
Ectoderm
Ont Id: UBERON_0000924
In vitro spontaneous differentiation
Marker Expressed
Neurofilament 200
Unknown

Microbiology / Virus Screening

Mycoplasma Negative

Genotyping

Karyotyping (Cell Line)

Has the cell line karyotype been analysed?
Yes
46,XX
Passage number: 15
Karyotyping method: G-Banding

Other Genotyping (Cell Line)

Genetic Modification

Genetic modifications not related to a disease
Transgene expression
AAVS 19q13.42
Transgenes of AsCas12 (AsCpf1) with PAM consensus 5'TTTV3' and tetracycline-transactivator (rtTA) in AAVS1 locus were detected by PCR.
CRISPR-associated (CRISPR/Cas) System