UMGWi004-B-3

General

iPSC Line

hPSCreg name UMGWi004-B-3
Cite as:
UMGWi004-B-3
iPSC line type Human induced pluripotent stem cell (hiPSC)
Similar iPSC lines
UMGWi004-B
(BNH1 _iPSC_WT_48)
UMGWi004-B-1
(BNH1_iPSC_FHS1_cr_well7_JR)
UMGWi004-B-2
(BNH1_iPSC_FHS1_cr_well12_JR)
UMGWi004-A
(BNH1 _iPSC_WT_8)
UMGWi001-B
(Z1 K3v3)
Donor diseases:
Floating-Harbor syndrome
Last update 9th April 2026
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Provider

Generator Department of Functional Genomics - Human Molecular Genetics (UMGW)

External iPSC Databases

BioSamples SAMEA120796679

General iPSC Information

* Is the cell line readily obtainable for third parties?
No
Subclone of

iPSC Genetic Modification

Disease/phenotype related modifications
Genetic modifications
FTSJ1  – FtsJ RNA 2'-O-methyltransferase 1 (target)
Isogenic modification
Xp11.23
NM_012280.4:c.331_332insG
NP_036412.1:p.(Asp111Glyfs*5)
hemizygous
The target region was amplified by PCR and subject to Sanger sequencing. Mutation status was verified by manual inspection of the chromatograms.
Mutated

Donor Information

General Donor Information

Sex male

Phenotype and Disease related information (Donor)

Diseases No disease was diagnosed.

Other Genotyping (Donor)

Is there genome-wide genotyping or functional data available?
No

Donor Relations

Other cell lines of this donor
All cell lines of this donor's relatives

External Databases (Donor)

BioSamples SAMEA115116692

Ethics

Also have a look at the ethics information for the parental line UMGWi004-B .
For generation of the cell line, who was the supplier of any recombined DNA vectors or commercial kits used?
Are you aware of any constraints on the use or distribution of the cell line from the owner or any parties identified in the query above? No

iPSC Derivation

General

The source cell information can be found in the parental cell line UMGWi004-B.

Reprogramming method

Vector type Non-integrating
Vector Episomal
Genes
Is reprogramming vector detectable?
No
Methods used
PCR
Notes on reprogramming vector detection No residual vector through PCR of EBNA1 and OriP in the iPSC detected
Files and images showing reprogramming vector expressed or silenced

Vector free reprogramming

Other

Selection criteria for clones Sanger sequencing of the target regions and visual inspection of the corresponding chromatograms using the online tool Benchling (www.benchling.org)
Derived under xeno-free conditions
No
Derived under GMP?
No
Available as clinical grade?
No

iPSC Culture Conditions

Surface coating Matrigel/Geltrex
Feeder cells
No
Passage method Mechanically
CO2 Concentration 5 %
Medium mTeSR™ 1
Supplements
Penicillin-Streptomycin, 10.000 U/ml Penicillin, 10 mg/ml Pan Biotech 1 %
Has Rock inhibitor (Y27632) been used at passage previously with this iPSC line?
No
Has Rock inhibitor (Y27632) been used at cryo previously with this iPSC line?
No
Has Rock inhibitor (Y27632) been used at thaw previously with this iPSC line?
Yes

iPSC Characterisation

Analysis of undifferentiated iPSCs
Marker Expressed Immunostaining RT-PCR Flow Cytometry Enzymatic Assay Expression Profiles
SOX2
Yes
TRA 1-60
Yes
POU5F1 (OCT-4)
Yes
NANOG
Yes
Morphology pictures
Differentiation Potency
Endoderm
Ont Id: UBERON_0000925
In vitro spontaneous differentiation
Marker Expressed
AFP
Yes
FOXA1
Yes
Morphology
Mesoderm
Ont Id: UBERON_0000926
In vitro spontaneous differentiation
Marker Expressed
HAND1
Yes
SMA
Yes
Morphology
Alexa 555
Alexa 488
Ectoderm
Ont Id: UBERON_0000924
In vitro spontaneous differentiation
Marker Expressed
SYN1
Yes
TUBB3
Yes
Morphology

Microbiology / Virus Screening

Mycoplasma Negative

Genotyping

Karyotyping (iPSC Line)

Has the iPSC line karyotype been analysed?
Yes
46,XY
Passage number: 4
Karyotyping method: low-coverage whole genome sequencing (lcWGS)

Other Genotyping (iPSC Line)